mitolina: MITOchondrial LINeage Analysis
نویسندگان
چکیده
منابع مشابه
Microgeographic Lineage Analysis by Mitochondrial Genotype: Variation in the Cotton Rat (sigmodon Hispidus).
We evaluate the use of mitochondrial DNA (mtDNA) genetic markers to describe population structure and matrilineal kinship on a microgeographic scale. An analysis of restriction site variation in 134 cotton rats (Sigmodon hispidus) collected from a 3.2 hectare field revealed significant spatial and temporal heterogeneity in frequencies of mtDNA genotypes among nest sites. Inspection of particula...
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The mitochondrial DNA of 62 Saami from the north of Norway was analyzed in the D loop hypervariable region I and II and sequences were compared to other gene pools. Two major (lineage 1 and 2) and two minor (lineage 3 and 4) maternal lineage clusters were found. Lineage 1 (56.9% of all hitherto analyzed Saami samples) contains a substantial number of branching haplotypes which are unknown in Eu...
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To estimate the maternal effects of dog breeds using mitochondrial DNA(mtDNA) haplotypes in the dogs with several clinical disorders, 600 base pairs of mtDNA D-loop region were amplified from 365 dogs and were determined for mtDNA sequences. The diversity of the 600-bp sequences was classified into 64 haplotypes, including 46 newly discovered haplotypes, and the haplotypes were grouped into fou...
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The osteoblast-lineage consists of cells at various stages of maturation that are essential for skeletal development, growth, and maintenance. Over the past decade, many of the signaling cascades that regulate this lineage have been elucidated; however, little is known of the networks that coordinate, modulate, and transmit these signals. Here, we identify a gene network specific to the osteobl...
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The Alu Ya-lineage is a group of related, short interspersed elements (SINEs) found in primates. This lineage includes subfamilies Ya1-Ya5, Ya5a2 and others. Some of these subfamilies are still actively mobilizing in the human genome. We have analyzed 2482 elements that reside in the human genome draft sequence and focused our analyses on the 2318 human autosomal Ya Alu elements. A total of 147...
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ژورنال
عنوان ژورنال: Journal of Open Source Software
سال: 2019
ISSN: 2475-9066
DOI: 10.21105/joss.01266